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  • Negative cofitness for CSW01_04440 from Vibrio cholerae E7946 ATCC 55056

    type IV pilin
    SEED: Type IV fimbrial biogenesis protein PilV
    KEGG: type IV pilus assembly protein PilV

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14205 methyl-accepting chemotaxis protein -0.62
    2 CSW01_18815 AraC family transcriptional regulator -0.61
    3 CSW01_13325 pilus assembly protein PilN -0.60
    4 CSW01_16725 DUF3800 domain-containing protein -0.59
    5 CSW01_11405 EEP domain-containing protein -0.59
    6 CSW01_15870 type II toxin-antitoxin system RelE/ParE family toxin -0.58
    7 CSW01_08530 RNA helicase -0.57
    8 CSW01_17355 D-3-phosphoglycerate dehydrogenase -0.57
    9 CSW01_11825 zinc transporter ZntB -0.56
    10 CSW01_16485 hypothetical protein -0.56
    11 CSW01_19490 GGDEF domain-containing protein -0.56
    12 CSW01_04815 YitT family protein -0.55
    13 CSW01_18410 ABC transporter ATP-binding protein -0.55
    14 CSW01_04085 response regulator -0.55
    15 CSW01_16505 DUF645 domain-containing protein -0.55
    16 CSW01_19375 NAD(P)-dependent oxidoreductase -0.55
    17 CSW01_14350 proconvertase P-domain protein -0.54
    18 CSW01_09860 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase -0.54
    19 CSW01_19095 DUF445 domain-containing protein -0.54
    20 CSW01_19590 two-component sensor histidine kinase -0.54

    Or look for positive cofitness