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  • Negative cofitness for CSW01_04425 from Vibrio cholerae E7946 ATCC 55056

    general secretion pathway protein GspH
    SEED: Type IV fimbrial biogenesis protein FimT
    KEGG: type IV fimbrial biogenesis protein FimT

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_06790 maleylacetoacetate isomerase -0.82
    2 CSW01_00700 DNA starvation/stationary phase protection protein -0.81
    3 CSW01_01975 chemotaxis protein CheX -0.81
    4 CSW01_05940 anthranilate phosphoribosyltransferase -0.80
    5 CSW01_07135 chromosome partitioning protein ParA -0.80
    6 CSW01_11265 flagellar basal-body protein -0.77
    7 CSW01_03695 ribosomal large subunit pseudouridine synthase D -0.77
    8 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) -0.77
    9 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB -0.77
    10 CSW01_08850 hypothetical protein -0.77
    11 CSW01_05730 inosine/guanosine kinase -0.76
    12 CSW01_17095 protein acetyltransferase -0.76
    13 CSW01_11250 molecular chaperone -0.76
    14 CSW01_04580 flagellar motor protein MotB -0.76
    15 CSW01_04900 magnesium and cobalt efflux protein CorC -0.76
    16 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator -0.76
    17 CSW01_01485 transcriptional regulator -0.76
    18 CSW01_05395 protease SohB -0.76
    19 CSW01_11205 flagellar basal-body rod protein FlgF -0.76
    20 CSW01_11560 riboflavin biosynthesis protein RibD -0.76

    Or look for positive cofitness