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  • Negative cofitness for CSW01_04345 from Vibrio cholerae E7946 ATCC 55056

    accessory colonization factor AcfA
    SEED: Accessory colonization factor AcfA
    KEGG: accessory colonization factor AcfA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_03105 hypoxanthine phosphoribosyltransferase -0.67
    2 CSW01_06725 tripartite tricarboxylate transporter substrate-binding protein -0.66
    3 CSW01_07805 DeoR/GlpR transcriptional regulator -0.65
    4 CSW01_15345 XRE family transcriptional regulator -0.64
    5 CSW01_11165 integrase -0.63
    6 CSW01_15230 glycosyl hydrolase -0.63
    7 CSW01_04815 YitT family protein -0.63
    8 CSW01_02275 arginine:ornithine antiporter -0.61
    9 CSW01_19460 PEGA domain-containing protein -0.59
    10 CSW01_07020 Chemotaxis protein methyltransferase 2 -0.59
    11 CSW01_15430 hypothetical protein -0.58
    12 CSW01_11825 zinc transporter ZntB -0.58
    13 CSW01_06310 transcriptional regulator -0.58
    14 CSW01_18410 ABC transporter ATP-binding protein -0.58
    15 CSW01_03600 DUF2799 domain-containing protein -0.57
    16 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase -0.57
    17 CSW01_15290 methyl-accepting chemotaxis protein -0.57
    18 CSW01_19135 MarR family transcriptional regulator -0.56
    19 CSW01_19350 sulfite exporter TauE/SafE family protein -0.56
    20 CSW01_10325 protein phosphatase CheZ -0.56

    Or look for positive cofitness