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  • Negative cofitness for CSW01_04330 from Vibrio cholerae E7946 ATCC 55056

    accessory colonization factor AcfC
    SEED: Accessory colonization factor AcfC
    KEGG: accessory colonization factor AcfC

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_08600 hypothetical protein -0.54
    2 CSW01_18300 LysR family transcriptional regulator -0.51
    3 CSW01_03735 DUF1904 domain-containing protein -0.50
    4 CSW01_15230 glycosyl hydrolase -0.49
    5 CSW01_17190 DNA mismatch repair protein MutT -0.47
    6 CSW01_18135 Rha family transcriptional regulator -0.47
    7 CSW01_18170 inosine/guanosine kinase -0.46
    8 CSW01_03550 transcriptional activator protein NhaR -0.46
    9 CSW01_08650 molecular chaperone TorD -0.44
    10 CSW01_12400 nucleoside triphosphate pyrophosphohydrolase -0.43
    11 CSW01_15095 protease -0.43
    12 CSW01_07705 sterol desaturase family protein -0.43
    13 CSW01_10780 hypothetical protein -0.43
    14 CSW01_18430 alpha-amylase -0.42
    15 CSW01_15200 PTS ascorbate transporter subunit IIC -0.42
    16 CSW01_04525 DUF188 domain-containing protein -0.41
    17 CSW01_13855 DUF4124 domain-containing protein -0.40
    18 CSW01_08035 DUF2726 domain-containing protein -0.40
    19 CSW01_16725 DUF3800 domain-containing protein -0.40
    20 CSW01_03440 bifunctional diguanylate cyclase/phosphodiesterase -0.40

    Or look for positive cofitness