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  • Negative cofitness for CSW01_04280 from Vibrio cholerae E7946 ATCC 55056

    toxin coregulated pilus biosynthesis outer membrane protein C
    SEED: Toxin co-regulated pilus biosynthesis protein C, outer membrane protein
    KEGG: toxin co-regulated pilus biosynthesis outer membrane protein C

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_16955 bifunctional metallophosphatase/5'-nucleotidase -0.51
    2 CSW01_00270 threonylcarbamoyl-AMP synthase -0.50
    3 CSW01_03705 chaperone protein ClpB -0.50
    4 CSW01_11165 integrase -0.49
    5 CSW01_03875 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ -0.47
    6 CSW01_12065 LysR family transcriptional regulator -0.47
    7 CSW01_01825 DNA mismatch repair protein MutL -0.46
    8 CSW01_00240 LysM peptidoglycan-binding domain-containing protein -0.46
    9 CSW01_17015 gamma-glutamyltransferase family protein -0.46
    10 CSW01_15230 glycosyl hydrolase -0.45
    11 CSW01_14930 response regulator -0.45
    12 CSW01_09900 ribonuclease D -0.45
    13 CSW01_11300 copper-exporting P-type ATPase A -0.44
    14 CSW01_02065 lysine-sensitive aspartokinase 3 -0.44
    15 CSW01_13825 D-aminoacyl-tRNA deacylase -0.44
    16 CSW01_01710 Rsd/AlgQ family anti-sigma factor -0.44
    17 CSW01_01480 phosphogluconate dehydratase -0.43
    18 CSW01_17065 conjugal transfer protein TraF -0.43
    19 CSW01_17925 3-oxoacyl-ACP synthase III -0.43
    20 CSW01_15345 XRE family transcriptional regulator -0.42

    Or look for positive cofitness