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  • Negative cofitness for CSW01_04270 from Vibrio cholerae E7946 ATCC 55056

    toxin coregulated pilus biosynthesis protein B
    SEED: Toxin co-regulated pilus biosynthesis protein B
    KEGG: toxin co-regulated pilus biosynthesis protein B

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17015 gamma-glutamyltransferase family protein -0.57
    2 CSW01_13825 D-aminoacyl-tRNA deacylase -0.53
    3 CSW01_03705 chaperone protein ClpB -0.49
    4 CSW01_10820 bifunctional UDP-sugar hydrolase/5'-nucleotidase -0.48
    5 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase -0.46
    6 CSW01_12295 cell division protein ZapD -0.45
    7 CSW01_05810 transporter -0.44
    8 CSW01_06505 glucan biosynthesis protein H -0.44
    9 CSW01_17065 conjugal transfer protein TraF -0.44
    10 CSW01_18455 hemagglutinin/proteinase -0.44
    11 CSW01_09865 isochorismate synthase -0.42
    12 CSW01_19130 FAA hydrolase family protein -0.42
    13 CSW01_03605 sodium:proton antiporter -0.42
    14 CSW01_03875 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ -0.41
    15 CSW01_00295 hypothetical protein -0.41
    16 CSW01_16820 PTS fructose transporter subunit IIBC -0.40
    17 CSW01_08410 AcrB/AcrD/AcrF family protein -0.40
    18 CSW01_05475 AraC family transcriptional regulator -0.40
    19 CSW01_01855 DUF2065 domain-containing protein -0.40
    20 CSW01_18855 maltose/maltodextrin ABC transporter substrate-binding protein MalE -0.40

    Or look for positive cofitness