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  • Negative cofitness for CSW01_04115 from Vibrio cholerae E7946 ATCC 55056

    [citrate (pro-3S)-lyase] ligase
    SEED: [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22)
    KEGG: [citrate (pro-3S)-lyase] ligase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_00140 dihydroxy-acid dehydratase -0.52
    2 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA -0.49
    3 CSW01_17940 lipase -0.46
    4 CSW01_03880 HTH-type transcriptional regulator IscR -0.45
    5 CSW01_05960 PHP domain-containing protein -0.45
    6 CSW01_03550 transcriptional activator protein NhaR -0.45
    7 CSW01_14895 mechanosensitive ion channel family protein -0.44
    8 CSW01_03845 hypothetical protein -0.43
    9 CSW01_03270 hypothetical protein -0.43
    10 CSW01_12075 RNA-directed DNA polymerase -0.41
    11 CSW01_08980 hypothetical protein -0.39
    12 CSW01_08675 DUF2007 domain-containing protein -0.39
    13 CSW01_10540 NAD(P)H-dependent oxidoreductase -0.38
    14 CSW01_14720 sigma-54-dependent Fis family transcriptional regulator -0.38
    15 CSW01_06365 AraC family transcriptional regulator -0.38
    16 CSW01_07855 TolC family protein -0.38
    17 CSW01_16955 bifunctional metallophosphatase/5'-nucleotidase -0.38
    18 CSW01_09285 porin -0.38
    19 CSW01_17965 arginine transporter permease subunit ArtM -0.37
    20 CSW01_18310 hypothetical protein -0.37

    Or look for positive cofitness