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  • Negative cofitness for CSW01_04050 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Transcriptional regulator near Vibriobactin biosynthetic gene custer

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_04040 ABC transporter ATP-binding protein -0.56
    2 CSW01_06810 hypothetical protein -0.55
    3 CSW01_06230 LrgB family protein -0.54
    4 CSW01_09810 preprotein translocase subunit Tim44 -0.53
    5 CSW01_16210 VOC family protein -0.52
    6 CSW01_03615 anhydro-N-acetylmuramic acid kinase -0.51
    7 CSW01_19190 DoxX family protein -0.50
    8 CSW01_17320 hypothetical protein -0.50
    9 CSW01_02705 transposase -0.50
    10 CSW01_16850 hybrid sensor histidine kinase/response regulator -0.50
    11 CSW01_19110 LysE family translocator -0.49
    12 CSW01_07985 EAL domain-containing protein -0.49
    13 CSW01_01330 oxidoreductase -0.49
    14 CSW01_04275 toxin coregulated pilus biosynthesis protein Q -0.49
    15 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA -0.48
    16 CSW01_09010 hypothetical protein -0.48
    17 CSW01_19385 tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY -0.48
    18 CSW01_00590 oxygen-independent coproporphyrinogen III oxidase -0.47
    19 CSW01_15295 aspartate aminotransferase family protein -0.47
    20 CSW01_18840 hypothetical protein -0.47

    Or look for positive cofitness