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  • Negative cofitness for CSW01_04030 from Vibrio cholerae E7946 ATCC 55056

    iron ABC transporter permease
    SEED: Ferric vibriobactin, enterobactin transport system, permease protein ViuD (TC 3.A.1.14.6)
    KEGG: iron complex transport system permease protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_06060 FAD-binding oxidoreductase -0.49
    2 CSW01_04555 tRNA pseudouridine(65) synthase TruC -0.44
    3 CSW01_04350 accessory colonization factor AcfD -0.43
    4 CSW01_14550 type VI secretion system contractile sheath small subunit -0.43
    5 CSW01_17575 mycothiol reductase -0.41
    6 CSW01_01225 capsular biosynthesis protein -0.41
    7 CSW01_10140 hypothetical protein -0.41
    8 CSW01_04270 toxin coregulated pilus biosynthesis protein B -0.38
    9 CSW01_06565 L-serine ammonia-lyase -0.38
    10 CSW01_11835 tRNA-binding protein -0.38
    11 CSW01_19390 3,4-dihydroxy-2-butanone-4-phosphate synthase -0.38
    12 CSW01_05305 long-chain fatty acid transporter -0.37
    13 CSW01_07980 NAD(P)-dependent oxidoreductase -0.37
    14 CSW01_12025 glutamate synthase subunit beta -0.37
    15 CSW01_01450 methyl-accepting chemotaxis protein -0.36
    16 CSW01_10790 arsenate reductase (glutaredoxin) -0.36
    17 CSW01_15900 hypothetical protein -0.36
    18 CSW01_14675 nicotinamide mononucleotide transporter -0.36
    19 CSW01_15005 HNH endonuclease -0.35
    20 CSW01_13240 N-succinylglutamate 5-semialdehyde dehydrogenase -0.35

    Or look for positive cofitness