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  • Negative cofitness for CSW01_03880 from Vibrio cholerae E7946 ATCC 55056

    HTH-type transcriptional regulator IscR
    SEED: Iron-sulfur cluster regulator IscR
    KEGG: Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17030 competence protein ComFB -0.67
    2 CSW01_18400 outer membrane lipoprotein-sorting protein -0.59
    3 CSW01_07050 hypothetical protein -0.58
    4 CSW01_12925 DUF2796 domain-containing protein -0.58
    5 CSW01_02840 DNA mismatch repair protein MutS -0.57
    6 CSW01_15000 rfbP protein -0.57
    7 CSW01_17760 DNA helicase IV -0.57
    8 CSW01_08920 C4-dicarboxylate ABC transporter permease -0.56
    9 CSW01_14750 peptide deformylase -0.55
    10 CSW01_11795 LysR family transcriptional regulator -0.55
    11 CSW01_06085 urocanate hydratase -0.54
    12 CSW01_05755 histidinol-phosphate transaminase -0.53
    13 CSW01_13360 argininosuccinate lyase -0.53
    14 CSW01_15215 cytochrome b -0.53
    15 CSW01_06740 2-methylcitrate synthase -0.52
    16 CSW01_00280 shikimate dehydrogenase -0.52
    17 CSW01_06635 transporter -0.52
    18 CSW01_15245 histidine kinase -0.52
    19 CSW01_00980 hypothetical protein -0.51
    20 CSW01_07620 DUF3305 domain-containing protein -0.51

    Or look for positive cofitness