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  • Negative cofitness for CSW01_03850 from Vibrio cholerae E7946 ATCC 55056

    tRNA guanosine(34) transglycosylase Tgt
    SEED: tRNA-guanine transglycosylase (EC 2.4.2.29)
    KEGG: queuine tRNA-ribosyltransferase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_09220 cyd operon protein YbgE -0.59
    2 CSW01_09030 MarR family transcriptional regulator -0.56
    3 CSW01_06565 L-serine ammonia-lyase -0.55
    4 CSW01_19300 polymer-forming cytoskeletal family protein -0.51
    5 CSW01_08505 trimethylamine-N-oxide reductase TorA -0.50
    6 CSW01_02700 hypothetical protein -0.49
    7 CSW01_08405 DNA-3-methyladenine glycosylase I -0.49
    8 CSW01_04235 hypothetical protein -0.48
    9 CSW01_13415 rhodanese-like domain-containing protein -0.48
    10 CSW01_17580 periplasmic nitrate reductase subunit alpha -0.48
    11 CSW01_08715 leucyl/phenylalanyl-tRNA--protein transferase -0.47
    12 CSW01_15945 DUF1817 domain-containing protein -0.46
    13 CSW01_18925 sensor domain-containing diguanylate cyclase -0.45
    14 CSW01_03240 chitobiase -0.45
    15 CSW01_17235 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein -0.45
    16 CSW01_18710 hemin ABC transporter substrate-binding protein -0.45
    17 CSW01_07730 CPXCG motif-containing cysteine-rich protein -0.44
    18 CSW01_01920 bacterioferritin -0.44
    19 CSW01_02455 YggS family pyridoxal phosphate enzyme -0.44
    20 CSW01_08535 TIGR02647 family protein -0.44

    Or look for positive cofitness