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  • Negative cofitness for CSW01_03695 from Vibrio cholerae E7946 ATCC 55056

    ribosomal large subunit pseudouridine synthase D
    SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase D

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_11710 transcriptional regulator -0.94
    2 CSW01_01295 ABC transporter permease -0.93
    3 CSW01_01300 sugar ABC transporter -0.92
    4 CSW01_00215 potassium uptake protein TrkH -0.92
    5 CSW01_01275 phosphomannomutase/phosphoglucomutase -0.91
    6 CSW01_01315 NAD-dependent alcohol dehydrogenase -0.91
    7 CSW01_01285 perosamine synthetase -0.91
    8 CSW01_01290 rfbG protein -0.91
    9 CSW01_01345 glycosyl transferase family 1 -0.91
    10 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase -0.91
    11 CSW01_01310 long-chain fatty acid--CoA ligase -0.91
    12 CSW01_01325 acetyltransferase -0.91
    13 CSW01_01280 GDP-mannose 4,6-dehydratase -0.91
    14 CSW01_01320 acyl-CoA reductase -0.91
    15 CSW01_01360 sugar transferase -0.91
    16 CSW01_01350 polysaccharide biosynthesis protein -0.90
    17 CSW01_09145 PTS fructose transporter subunit IIA -0.90
    18 CSW01_01250 polymerase -0.90
    19 CSW01_06715 tripartite tricarboxylate transporter permease -0.90
    20 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase -0.90

    Or look for positive cofitness