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  • Negative cofitness for CSW01_03675 from Vibrio cholerae E7946 ATCC 55056

    norspermidine sensor
    SEED: Predicted polyamine sensor NspS, involved in biofilm formation
    KEGG: putative spermidine/putrescine transport system substrate-binding protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_04595 DUF423 domain-containing protein -0.53
    2 CSW01_14090 NAD(P)-dependent oxidoreductase -0.53
    3 CSW01_15120 iron(III) ABC transporter permease -0.51
    4 CSW01_11915 hypothetical protein -0.51
    5 CSW01_14170 AEC family transporter -0.51
    6 CSW01_19490 GGDEF domain-containing protein -0.49
    7 CSW01_13960 potassium uptake protein TrkH -0.49
    8 CSW01_01120 orotate phosphoribosyltransferase -0.49
    9 CSW01_08625 chromosome partition protein MukE -0.48
    10 CSW01_16705 hypothetical protein -0.48
    11 CSW01_02880 regulatory protein RecX -0.47
    12 CSW01_19085 amidinotransferase -0.46
    13 CSW01_17995 DUF3763 domain-containing protein -0.46
    14 CSW01_15110 iron(III) ABC transporter substrate-binding protein -0.46
    15 CSW01_09245 Holliday junction branch migration protein RuvA -0.46
    16 CSW01_02855 sulfate/thiosulfate ABC transporter permease CysT -0.45
    17 CSW01_02890 aspartate kinase -0.45
    18 CSW01_19605 short chain dehydrogenase -0.45
    19 CSW01_11120 hypothetical protein -0.45
    20 CSW01_01215 capsular biosynthesis protein -0.45

    Or look for positive cofitness