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  • Negative cofitness for CSW01_03440 from Vibrio cholerae E7946 ATCC 55056

    bifunctional diguanylate cyclase/phosphodiesterase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_00965 cyclic AMP-GMP synthase -0.60
    2 CSW01_19015 chemotaxis protein -0.53
    3 CSW01_07895 class II fumarate hydratase -0.50
    4 CSW01_13455 phaC PHA synthase -0.49
    5 CSW01_06950 ATP-dependent RNA helicase HrpA -0.49
    6 CSW01_18310 hypothetical protein -0.47
    7 CSW01_16130 acetyltransferase -0.47
    8 CSW01_19195 LysR family transcriptional regulator -0.46
    9 CSW01_00985 integrase -0.46
    10 CSW01_14640 DUF3012 domain-containing protein -0.46
    11 CSW01_14260 cation tolerance protein CutA -0.46
    12 CSW01_17375 SAM-dependent methyltransferase -0.46
    13 CSW01_10875 redox-regulated ATPase YchF -0.46
    14 CSW01_08335 ABC transporter ATP-binding protein -0.45
    15 CSW01_19445 1-pyrroline-5-carboxylate dehydrogenase -0.45
    16 CSW01_02470 LuxR family transcriptional regulator -0.45
    17 CSW01_08935 N-acetylmannosamine-6-phosphate 2-epimerase -0.45
    18 CSW01_13795 type II secretion system protein GspC -0.45
    19 CSW01_17895 hypothetical protein -0.45
    20 CSW01_07195 cytochrome biogenesis protein -0.43

    Or look for positive cofitness