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  • Negative cofitness for CSW01_03400 from Vibrio cholerae E7946 ATCC 55056

    tRNA pseudouridine(55) synthase TruB
    SEED: tRNA pseudouridine synthase B (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase B

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_02530 D-erythrose-4-phosphate dehydrogenase -0.55
    2 CSW01_05670 protease HtpX -0.55
    3 CSW01_10375 HIT family protein -0.54
    4 CSW01_00590 oxygen-independent coproporphyrinogen III oxidase -0.54
    5 CSW01_00575 class I SAM-dependent methyltransferase -0.53
    6 CSW01_06810 hypothetical protein -0.51
    7 CSW01_06825 acylphosphatase -0.51
    8 CSW01_08870 restriction endonuclease subunit S -0.51
    9 CSW01_01000 glutathione-disulfide reductase -0.51
    10 CSW01_05815 glutaredoxin -0.50
    11 CSW01_18730 DUF406 domain-containing protein -0.49
    12 CSW01_12080 recombinase RecF -0.49
    13 CSW01_12680 cytosol aminopeptidase -0.48
    14 CSW01_05220 cyclic pyranopterin monophosphate synthase MoaC -0.48
    15 CSW01_12085 HNH endonuclease -0.47
    16 CSW01_13155 ribonuclease R -0.47
    17 CSW01_16850 hybrid sensor histidine kinase/response regulator -0.47
    18 CSW01_18905 GGDEF domain-containing protein -0.47
    19 CSW01_07245 hybrid sensor histidine kinase/response regulator -0.46
    20 CSW01_15170 hypothetical protein -0.46

    Or look for positive cofitness