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  • Negative cofitness for CSW01_03175 from Vibrio cholerae E7946 ATCC 55056

    penicillin-binding protein 1B
    SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
    KEGG: penicillin-binding protein 1B

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17095 protein acetyltransferase -0.77
    2 CSW01_00790 vitamin B12 transporter BtuB -0.72
    3 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) -0.71
    4 CSW01_03100 TetR/AcrR family transcriptional regulator -0.71
    5 CSW01_00685 lysophospholipase -0.70
    6 CSW01_18300 LysR family transcriptional regulator -0.68
    7 CSW01_01485 transcriptional regulator -0.68
    8 CSW01_05425 hypothetical protein -0.68
    9 CSW01_11185 flagellar assembly peptidoglycan hydrolase FlgJ -0.68
    10 CSW01_11265 flagellar basal-body protein -0.68
    11 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator -0.68
    12 CSW01_19215 glucosamine-6-phosphate deaminase -0.67
    13 CSW01_02210 DUF3971 domain-containing protein -0.67
    14 CSW01_07085 carboxypeptidase M32 -0.67
    15 CSW01_10600 flagellar biosynthetic protein FliO -0.67
    16 CSW01_01750 transporter -0.67
    17 CSW01_10350 flagellar biosynthesis protein FlhA -0.67
    18 CSW01_05730 inosine/guanosine kinase -0.67
    19 CSW01_10585 flagellar type III secretion system protein FliR -0.66
    20 CSW01_16665 nucleotide pyrophosphohydrolase -0.65

    Or look for positive cofitness