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  • Negative cofitness for CSW01_02815 from Vibrio cholerae E7946 ATCC 55056

    tRNA pseudouridine(13) synthase TruD
    SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
    KEGG: tRNA pseudouridine synthase D

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_02055 sodium:proton antiporter -0.62
    2 CSW01_08380 TIGR01621 family pseudouridine synthase -0.60
    3 CSW01_07905 DUF2127 domain-containing protein -0.59
    4 CSW01_05660 dethiobiotin synthase -0.58
    5 CSW01_00410 universal stress protein UspA -0.57
    6 CSW01_05845 HDOD domain-containing protein -0.57
    7 CSW01_06380 GTP cyclohydrolase II -0.57
    8 CSW01_03970 DNA ligase -0.57
    9 CSW01_11555 riboflavin synthase -0.56
    10 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase -0.56
    11 CSW01_01865 hypothetical protein -0.56
    12 CSW01_00795 alkaline serine protease -0.56
    13 CSW01_12320 3',5'-cyclic-AMP phosphodiesterase -0.55
    14 CSW01_10700 flagellin D -0.55
    15 CSW01_11560 riboflavin biosynthesis protein RibD -0.55
    16 CSW01_08250 EAL domain-containing protein -0.54
    17 CSW01_10255 cytochrome c-type biogenesis protein CcmH -0.54
    18 CSW01_00560 DNA polymerase I -0.54
    19 CSW01_05425 hypothetical protein -0.54
    20 CSW01_11745 cysteine desulfurase sulfur acceptor subunit CsdE -0.54

    Or look for positive cofitness