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  • Negative cofitness for CSW01_02700 from Vibrio cholerae E7946 ATCC 55056

    hypothetical protein
    SEED: DNA repair protein RadC
    KEGG: DNA repair protein RadC

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_01825 DNA mismatch repair protein MutL -0.58
    2 CSW01_03600 DUF2799 domain-containing protein -0.53
    3 CSW01_09640 C4-dicarboxylate ABC transporter permease -0.53
    4 CSW01_07020 Chemotaxis protein methyltransferase 2 -0.52
    5 CSW01_08560 acyl-CoA thioester hydrolase YciA -0.51
    6 CSW01_11000 hypothetical protein -0.50
    7 CSW01_06725 tripartite tricarboxylate transporter substrate-binding protein -0.49
    8 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt -0.49
    9 CSW01_18215 N-acetylglucosamine-binding protein GbpA -0.49
    10 CSW01_04815 YitT family protein -0.48
    11 CSW01_02275 arginine:ornithine antiporter -0.48
    12 CSW01_15310 exoribonuclease R -0.46
    13 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC -0.46
    14 CSW01_19135 MarR family transcriptional regulator -0.46
    15 CSW01_09260 peptidylprolyl isomerase -0.46
    16 CSW01_06175 N-acetyltransferase -0.45
    17 CSW01_18410 ABC transporter ATP-binding protein -0.45
    18 CSW01_10795 NAD(P)H:quinone oxidoreductase -0.45
    19 CSW01_18190 exoribonuclease 2 -0.45
    20 CSW01_03830 isocitrate lyase -0.44

    Or look for positive cofitness