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  • Negative cofitness for CSW01_02170 from Vibrio cholerae E7946 ATCC 55056

    type II secretion system protein
    SEED: MSHA biogenesis protein MshO
    KEGG: MSHA biogenesis protein MshO

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_08190 ABC transporter permease -0.87
    2 CSW01_10385 Fe(2+) transporter permease subunit FeoB -0.87
    3 CSW01_02835 RNA polymerase sigma factor RpoS -0.86
    4 CSW01_00215 potassium uptake protein TrkH -0.85
    5 CSW01_10390 ferrous iron transport protein A -0.85
    6 CSW01_11275 NADPH-dependent ferric siderophore reductase -0.85
    7 CSW01_04020 vibriobactin biosynthesis amide synthase VibH -0.85
    8 CSW01_11710 transcriptional regulator -0.84
    9 CSW01_18205 dehydratase -0.84
    10 CSW01_01300 sugar ABC transporter -0.84
    11 CSW01_01295 ABC transporter permease -0.84
    12 CSW01_10725 hypothetical protein -0.84
    13 CSW01_10180 Na+/H+ antiporter NhaC -0.83
    14 CSW01_01250 polymerase -0.83
    15 CSW01_13625 C4-dicarboxylate ABC transporter -0.83
    16 CSW01_01260 polysaccharide deacetylase -0.83
    17 CSW01_11270 non-ribosomal peptide synthetase -0.82
    18 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -0.82
    19 CSW01_09145 PTS fructose transporter subunit IIA -0.82
    20 CSW01_00620 class I adenylate cyclase -0.82

    Or look for positive cofitness