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  • Negative cofitness for CSW01_02165 from Vibrio cholerae E7946 ATCC 55056

    MSHA pilin protein MshD
    SEED: MSHA pilin protein MshD
    KEGG: MSHA pilin protein MshD

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_10385 Fe(2+) transporter permease subunit FeoB -0.87
    2 CSW01_08190 ABC transporter permease -0.83
    3 CSW01_13625 C4-dicarboxylate ABC transporter -0.82
    4 CSW01_02835 RNA polymerase sigma factor RpoS -0.82
    5 CSW01_08615 Lrp/AsnC family transcriptional regulator -0.82
    6 CSW01_08195 ABC transporter ATP-binding protein -0.81
    7 CSW01_10390 ferrous iron transport protein A -0.80
    8 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -0.80
    9 CSW01_00215 potassium uptake protein TrkH -0.79
    10 CSW01_00620 class I adenylate cyclase -0.79
    11 CSW01_11710 transcriptional regulator -0.79
    12 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -0.78
    13 CSW01_11270 non-ribosomal peptide synthetase -0.78
    14 CSW01_01295 ABC transporter permease -0.78
    15 CSW01_11275 NADPH-dependent ferric siderophore reductase -0.78
    16 CSW01_10180 Na+/H+ antiporter NhaC -0.78
    17 CSW01_01250 polymerase -0.78
    18 CSW01_06075 DUF3581 domain-containing protein -0.78
    19 CSW01_01260 polysaccharide deacetylase -0.78
    20 CSW01_01300 sugar ABC transporter -0.77

    Or look for positive cofitness