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  • Negative cofitness for CSW01_02100 from Vibrio cholerae E7946 ATCC 55056

    RNase E specificity factor CsrD
    SEED: MSHA biogenesis protein MshH

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_02255 C4-dicarboxylate ABC transporter substrate-binding protein -0.84
    2 CSW01_08465 ABC transporter ATP-binding protein -0.84
    3 CSW01_05250 zinc/cadmium/mercury/lead-transporting ATPase -0.83
    4 CSW01_04650 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase -0.83
    5 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase -0.82
    6 CSW01_01290 rfbG protein -0.81
    7 CSW01_01350 polysaccharide biosynthesis protein -0.81
    8 CSW01_01285 perosamine synthetase -0.81
    9 CSW01_01310 long-chain fatty acid--CoA ligase -0.81
    10 CSW01_01300 sugar ABC transporter -0.81
    11 CSW01_01520 acetyl-coenzyme A synthetase -0.81
    12 CSW01_01345 glycosyl transferase family 1 -0.81
    13 CSW01_01315 NAD-dependent alcohol dehydrogenase -0.81
    14 CSW01_01320 acyl-CoA reductase -0.81
    15 CSW01_01280 GDP-mannose 4,6-dehydratase -0.81
    16 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase -0.81
    17 CSW01_01275 phosphomannomutase/phosphoglucomutase -0.80
    18 CSW01_01305 acyl carrier protein -0.80
    19 CSW01_03815 peroxidase -0.80
    20 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase -0.80

    Or look for positive cofitness