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  • Negative cofitness for CSW01_01440 from Vibrio cholerae E7946 ATCC 55056

    lysine:cadaverine antiporter
    SEED: Lysine/cadaverine antiporter membrane protein CadB
    KEGG: cadaverine:lysine antiporter

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_10335 RNA polymerase sigma factor FliA -0.71
    2 CSW01_10620 flagellar hook-length control protein FliK -0.69
    3 CSW01_10685 flagellar hook-associated protein 2 -0.69
    4 CSW01_02110 MSHA biogenesis protein MshJ -0.64
    5 CSW01_02135 MSHA biogenesis protein MshE -0.63
    6 CSW01_02165 MSHA pilin protein MshD -0.63
    7 CSW01_10680 flagellar protein FliT -0.62
    8 CSW01_02170 type II secretion system protein -0.62
    9 CSW01_11170 flagellin A -0.62
    10 CSW01_10345 flagellar biosynthesis protein FlhF -0.62
    11 CSW01_04655 HTH-type transcriptional regulator TreR -0.60
    12 CSW01_02140 type II secretion system F family protein -0.60
    13 CSW01_17675 GGDEF domain-containing protein -0.59
    14 CSW01_02180 MSHA biogenesis protein MshQ -0.59
    15 CSW01_10675 flagellar protein FliS -0.59
    16 CSW01_02120 pilus (MSHA type) biogenesis protein MshL -0.59
    17 CSW01_02130 MSHA biogenesis protein MshN -0.59
    18 CSW01_02115 MSHA biogenesis protein MshK -0.59
    19 CSW01_11180 flagellar hook-associated protein FlgK -0.58
    20 CSW01_04575 flagellar motor protein PomA -0.58

    Or look for positive cofitness