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  • Negative cofitness for CSW01_01435 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator CadC
    SEED: Transcriptional activator of cad operon
    KEGG: transcriptional activator of cad operon

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_04655 HTH-type transcriptional regulator TreR -0.48
    2 CSW01_10335 RNA polymerase sigma factor FliA -0.48
    3 CSW01_10680 flagellar protein FliT -0.48
    4 CSW01_10620 flagellar hook-length control protein FliK -0.48
    5 CSW01_12575 transcriptional regulator LeuO -0.48
    6 CSW01_12245 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -0.47
    7 CSW01_10700 flagellin D -0.45
    8 CSW01_10685 flagellar hook-associated protein 2 -0.45
    9 CSW01_00730 lysoplasmalogenase -0.43
    10 CSW01_14890 peptidase T -0.41
    11 CSW01_03655 murein transglycosylase -0.41
    12 CSW01_00740 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -0.41
    13 CSW01_05845 HDOD domain-containing protein -0.40
    14 CSW01_02135 MSHA biogenesis protein MshE -0.40
    15 CSW01_06065 isoprenylcysteine carboxylmethyltransferase family protein -0.39
    16 CSW01_02110 MSHA biogenesis protein MshJ -0.38
    17 CSW01_17675 GGDEF domain-containing protein -0.38
    18 CSW01_02120 pilus (MSHA type) biogenesis protein MshL -0.37
    19 CSW01_11170 flagellin A -0.36
    20 CSW01_02130 MSHA biogenesis protein MshN -0.36

    Or look for positive cofitness