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  • Negative cofitness for CSW01_01205 from Vibrio cholerae E7946 ATCC 55056

    wavE lipopolysaccharide synthesis family protein
    SEED: Lipopolysaccharide synthesis protein WavD

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17690 NADH-dependent alcohol dehydrogenase -0.70
    2 CSW01_18100 sensor domain-containing phosphodiesterase -0.67
    3 CSW01_02835 RNA polymerase sigma factor RpoS -0.61
    4 CSW01_13495 MATE family efflux transporter -0.61
    5 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase -0.60
    6 CSW01_15000 rfbP protein -0.60
    7 CSW01_14180 hypothetical protein -0.59
    8 CSW01_03105 hypoxanthine phosphoribosyltransferase -0.59
    9 CSW01_10725 hypothetical protein -0.59
    10 CSW01_04815 YitT family protein -0.58
    11 CSW01_08710 hypothetical protein -0.58
    12 CSW01_18205 dehydratase -0.58
    13 CSW01_10220 DNA topoisomerase III -0.58
    14 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC -0.57
    15 CSW01_04020 vibriobactin biosynthesis amide synthase VibH -0.57
    16 CSW01_10795 NAD(P)H:quinone oxidoreductase -0.57
    17 CSW01_10135 hypothetical protein -0.57
    18 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD -0.56
    19 CSW01_09965 DUF2989 domain-containing protein -0.56
    20 CSW01_19375 NAD(P)-dependent oxidoreductase -0.56

    Or look for positive cofitness