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  • Negative cofitness for CSW01_00915 from Vibrio cholerae E7946 ATCC 55056

    nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein
    SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system substrate-binding protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_11525 hypothetical protein -0.53
    2 CSW01_13205 ABC transporter ATP-binding protein -0.53
    3 CSW01_17065 conjugal transfer protein TraF -0.52
    4 CSW01_04595 DUF423 domain-containing protein -0.52
    5 CSW01_10060 YchF/TatD family DNA exonuclease -0.51
    6 CSW01_10185 histidine kinase -0.51
    7 CSW01_01855 DUF2065 domain-containing protein -0.47
    8 CSW01_00780 hypothetical protein -0.46
    9 CSW01_00785 tRNA (uridine(54)-C5)-methyltransferase TrmA -0.46
    10 CSW01_11795 LysR family transcriptional regulator -0.45
    11 CSW01_19295 phospho-sugar mutase -0.44
    12 CSW01_14170 AEC family transporter -0.44
    13 CSW01_08750 1-aminocyclopropane-1-carboxylate deaminase -0.44
    14 CSW01_06640 histidine kinase -0.43
    15 CSW01_08375 CDP-alcohol phosphatidyltransferase family protein -0.42
    16 CSW01_14700 MFS transporter -0.42
    17 CSW01_17340 23S rRNA methyltransferase -0.42
    18 CSW01_08215 Bcr/CflA family drug resistance efflux transporter -0.41
    19 CSW01_03735 DUF1904 domain-containing protein -0.40
    20 CSW01_13610 membrane protein FxsA -0.40

    Or look for positive cofitness