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  • Negative cofitness for CSW01_00910 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter ATP-binding protein
    SEED: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system ATP-binding protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_07260 type I secretion system permease/ATPase -0.50
    2 CSW01_05165 electron transport complex subunit RsxC -0.49
    3 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase -0.49
    4 CSW01_00195 hypothetical protein -0.49
    5 CSW01_01840 GTPase HflX -0.48
    6 CSW01_04285 toxin coregulated pilus biosynthesis protein R -0.48
    7 CSW01_12980 ATP-dependent RNA helicase DbpA -0.48
    8 CSW01_13000 peptidylprolyl isomerase -0.47
    9 CSW01_00090 valine--pyruvate transaminase -0.46
    10 CSW01_11810 short-chain dehydrogenase -0.46
    11 CSW01_13315 fimbrial protein -0.44
    12 CSW01_05770 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase -0.44
    13 CSW01_08155 hypothetical protein -0.42
    14 CSW01_13185 peptidylprolyl isomerase -0.42
    15 CSW01_14765 cation:proton antiporter -0.41
    16 CSW01_18010 cytochrome C554 -0.41
    17 CSW01_07445 macrodomain Ter protein MatP -0.41
    18 CSW01_04765 hypothetical protein -0.41
    19 CSW01_04345 accessory colonization factor AcfA -0.40
    20 CSW01_01580 ferredoxin -0.40

    Or look for positive cofitness