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  • Negative cofitness for CSW01_00785 from Vibrio cholerae E7946 ATCC 55056

    tRNA (uridine(54)-C5)-methyltransferase TrmA
    KEGG: tRNA (uracil-5-)-methyltransferase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_03265 peptide ABC transporter substrate-binding protein -0.50
    2 CSW01_11820 RimK family alpha-L-glutamate ligase -0.50
    3 CSW01_00920 ABC transporter permease -0.49
    4 CSW01_01100 PTS N-acetylmuramic acid EIIBC component -0.48
    5 CSW01_10005 hypothetical protein -0.48
    6 CSW01_00970 hypothetical protein -0.48
    7 CSW01_11090 XRE family transcriptional regulator -0.47
    8 CSW01_04295 toxin coregulated pilus biosynthesis protein S -0.47
    9 CSW01_05275 hypothetical protein -0.47
    10 CSW01_18955 hypothetical protein -0.47
    11 CSW01_00915 nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein -0.46
    12 CSW01_15700 hypothetical protein -0.46
    13 CSW01_17240 2-aminoethylphosphonate--pyruvate aminotransferase -0.45
    14 CSW01_17420 transcriptional regulator -0.44
    15 CSW01_04160 NAD(P)/FAD-dependent oxidoreductase -0.44
    16 CSW01_03530 sulfite exporter TauE/SafE family protein -0.44
    17 CSW01_05895 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB -0.44
    18 CSW01_07880 cytochrome ubiquinol oxidase subunit I -0.44
    19 CSW01_15335 glycine cleavage system protein H -0.43
    20 CSW01_02430 non-canonical purine NTP pyrophosphatase -0.43

    Or look for positive cofitness