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  • Negative cofitness for CSW01_00740 from Vibrio cholerae E7946 ATCC 55056

    16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
    SEED: 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171)
    KEGG: ribosomal RNA small subunit methyltransferase D

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_00330 fluoride efflux transporter CrcB -0.52
    2 CSW01_11610 30S ribosomal protein S6--L-glutamate ligase -0.52
    3 CSW01_14115 glycogen/starch/alpha-glucan phosphorylase -0.51
    4 CSW01_11290 hypothetical protein -0.51
    5 CSW01_18065 allophanate hydrolase -0.50
    6 CSW01_06415 MBL fold metallo-hydrolase -0.49
    7 CSW01_15310 exoribonuclease R -0.48
    8 CSW01_19140 organic hydroperoxide resistance protein -0.48
    9 CSW01_10705 flagellin E -0.47
    10 CSW01_08065 sensor histidine kinase -0.47
    11 CSW01_10385 Fe(2+) transporter permease subunit FeoB -0.46
    12 CSW01_02235 hypothetical protein -0.46
    13 CSW01_14470 DUF134 domain-containing protein -0.45
    14 CSW01_13565 cell division protein ZapB -0.45
    15 CSW01_19415 hypothetical protein -0.45
    16 CSW01_19465 hypothetical protein -0.44
    17 CSW01_05260 hypothetical protein -0.44
    18 CSW01_16880 potassium transporter Kup -0.44
    19 CSW01_17855 autoinducer 2 sensor kinase/phosphatase LuxQ -0.43
    20 CSW01_09120 aldehyde dehydrogenase -0.43

    Or look for positive cofitness