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  • Negative cofitness for CSW01_00280 from Vibrio cholerae E7946 ATCC 55056

    shikimate dehydrogenase
    SEED: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_16835 catabolite repressor/activator -0.84
    2 CSW01_12885 fructose 1,6-bisphosphatase -0.80
    3 CSW01_01555 ATP-dependent RNA helicase RhlB -0.80
    4 CSW01_05730 inosine/guanosine kinase -0.80
    5 CSW01_11920 NupC/NupG family nucleoside CNT transporter -0.79
    6 CSW01_03980 IMP dehydrogenase -0.79
    7 CSW01_12365 inorganic phosphate transporter -0.79
    8 CSW01_01485 transcriptional regulator -0.78
    9 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) -0.78
    10 CSW01_08660 PurR family transcriptional regulator -0.78
    11 CSW01_05065 N-acetylglucosamine repressor -0.78
    12 CSW01_19215 glucosamine-6-phosphate deaminase -0.77
    13 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase -0.77
    14 CSW01_02135 MSHA biogenesis protein MshE -0.77
    15 CSW01_07085 carboxypeptidase M32 -0.77
    16 CSW01_17325 transaldolase -0.76
    17 CSW01_03920 peptidase B -0.76
    18 CSW01_12680 cytosol aminopeptidase -0.76
    19 CSW01_03210 iron ABC transporter permease -0.76
    20 CSW01_04820 serine hydroxymethyltransferase -0.75

    Or look for positive cofitness