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  • Negative cofitness for CSW01_00225 from Vibrio cholerae E7946 ATCC 55056

    16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
    KEGG: ribosomal RNA small subunit methyltransferase B

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18965 DUF1255 domain-containing protein -0.53
    2 CSW01_12060 hypothetical protein -0.53
    3 CSW01_19010 methyl-accepting chemotaxis protein -0.52
    4 CSW01_03045 ubiquinol-cytochrome c reductase iron-sulfur subunit -0.51
    5 CSW01_09355 DUF2219 domain-containing protein -0.50
    6 CSW01_02770 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase -0.47
    7 CSW01_10140 hypothetical protein -0.47
    8 CSW01_07330 colonization factor -0.45
    9 CSW01_16430 hypothetical protein -0.43
    10 CSW01_19000 ABC transporter ATP-binding protein -0.43
    11 CSW01_13675 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase -0.42
    12 CSW01_05585 DUF412 domain-containing protein -0.42
    13 CSW01_18135 Rha family transcriptional regulator -0.41
    14 CSW01_10255 cytochrome c-type biogenesis protein CcmH -0.41
    15 CSW01_17505 hypothetical protein -0.41
    16 CSW01_15945 DUF1817 domain-containing protein -0.40
    17 CSW01_02455 YggS family pyridoxal phosphate enzyme -0.40
    18 CSW01_11570 glutamate-5-semialdehyde dehydrogenase -0.40
    19 CSW01_18030 hypothetical protein -0.40
    20 CSW01_18665 permease -0.39

    Or look for positive cofitness