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  • Negative cofitness for Sama_3241 from Shewanella amazonensis SB2B

    phosphoglycerate transport regulatory protein PgtC, putative (RefSeq)
    SEED: Phosphoglycerate transport regulatory protein PgtC
    KEGG: phosphoglycerate transport regulatory protein PgtC

    Computing cofitness values with 190 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Sama_0589 phosphate-selective porin O and P (RefSeq) -0.58
    2 Sama_0588 FMN-binding (RefSeq) -0.58
    3 Sama_0507 hypothetical protein (RefSeq) -0.56
    4 Sama_0587 PepSY-associated TM helix (RefSeq) -0.55
    5 Sama_0373 regulatory protein AmpE (RefSeq) -0.53
    6 Sama_1907 lipoprotein-34 NlpB (RefSeq) -0.48
    7 Sama_2063 hypothetical protein (RefSeq) -0.47
    8 Sama_3331 hypothetical protein (RefSeq) -0.44
    9 Sama_1887 AsmA protein (RefSeq) -0.44
    10 Sama_0397 hypothetical protein (RefSeq) -0.44
    11 Sama_0590 putative TonB-dependent receptor protein (RefSeq) -0.40
    12 Sama_0429 predicted FeS cluster maintenance protein (from data) -0.40
    13 Sama_1692 glucosyltransferase MdoH (RefSeq) -0.40
    14 Sama_1815 acyl-CoA dehydrogenase (RefSeq) -0.40
    15 Sama_1585 carboxy-terminal protease (RefSeq) -0.39
    16 Sama_0246 cytochrome c (RefSeq) -0.39
    17 Sama_1579 virulence factor MCE-like protein related (RefSeq) -0.38
    18 Sama_2385 small protein A (RefSeq) -0.38
    19 Sama_3239 outer membrane porin, putative (RefSeq) -0.38
    20 Sama_1848 gonadoliberin III-related protein (RefSeq) -0.37

    Or look for positive cofitness