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  • Negative cofitness for Sama_2003 from Shewanella amazonensis SB2B

    inter-alpha-trypsin inhibitor domain-containing protein (RefSeq)
    SEED: Inter-alpha-trypsin inhibitor domain protein
    KEGG: uncharacterized protein

    Computing cofitness values with 190 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Sama_1202 GGDEF domain-containing protein (RefSeq) -0.45
    2 Sama_3148 MaoC domain-containing protein (RefSeq) -0.40
    3 Sama_2371 hypothetical protein (RefSeq) -0.38
    4 Sama_3231 hypothetical protein (RefSeq) -0.36
    5 Sama_0884 acpS 4'-phosphopantetheinyl transferase (RefSeq) -0.35
    6 Sama_0316 hypothetical protein (RefSeq) -0.34
    7 Sama_3494 response regulator receiver protein (RefSeq) -0.34
    8 Sama_3409 putative iron uptake protein (RefSeq) -0.34
    9 Sama_2090 hypothetical protein (RefSeq) -0.33
    10 Sama_3508 hypothetical protein (RefSeq) -0.33
    11 Sama_0163 hypothetical protein (RefSeq) -0.33
    12 Sama_1714 no description -0.33
    13 Sama_0170 general secretion pathway protein E (RefSeq) -0.32
    14 Sama_2307 flagellin-like protein (RefSeq) -0.32
    15 Sama_2506 peptidyl-prolyl cis-trans isomerase FklB (RefSeq) -0.32
    16 Sama_0386 anti-RNA polymerase sigma 70 factor (RefSeq) -0.32
    17 Sama_3176 polysulfide reductase, subunit B (RefSeq) -0.31
    18 Sama_1882 LysR family transcriptional regulator (RefSeq) -0.31
    19 Sama_1978 3-oxoacyl-(acyl-carrier-protein) synthase II (RefSeq) -0.31
    20 Sama_0528 cytochrome c family protein (RefSeq) -0.31

    Or look for positive cofitness