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  • Negative cofitness for Shew_3780 from Shewanella loihica PV-4

    TAP domain-containing protein (RefSeq)
    SEED: FIG032621: Hydrolase, alpha/beta hydrolase fold family

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3439 type II secretion system protein (RefSeq) -0.50
    2 Shew_3440 prepilin peptidase (RefSeq) -0.46
    3 Shew_3759 imidazolonepropionase (RefSeq) -0.45
    4 Shew_0231 hypothetical protein (RefSeq) -0.44
    5 Shew_1657 sucC succinyl-CoA synthetase subunit beta (RefSeq) -0.43
    6 Shew_1397 amino acid/peptide transporter (RefSeq) -0.43
    7 Shew_3438 type IV-A pilus assembly ATPase PilB (RefSeq) -0.42
    8 Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) -0.41
    9 Shew_0618 hypothetical protein (RefSeq) -0.40
    10 Shew_3372 arginase/agmatinase/formiminoglutamase (RefSeq) -0.40
    11 Shew_3444 mutator MutT protein (RefSeq) -0.39
    12 Shew_1625 L-serine dehydratase 1 (RefSeq) -0.39
    13 Shew_1815 hypothetical protein (RefSeq) -0.39
    14 Shew_0233 hypothetical protein (RefSeq) -0.38
    15 Shew_2110 hypothetical protein (RefSeq) -0.38
    16 Shew_2576 3-oxoacid CoA-transferase, B subunit (RefSeq) -0.38
    17 Shew_2407 putative periplasmic protease (RefSeq) -0.37
    18 Shew_2498 extracellular solute-binding protein (RefSeq) -0.37
    19 Shew_1337 hypothetical protein (RefSeq) -0.37
    20 Shew_2135 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) -0.37

    Or look for positive cofitness