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  • Negative cofitness for Shew_3743 from Shewanella loihica PV-4

    chorismate lyase (RefSeq)
    SEED: Chorismate--pyruvate lyase (EC 4.1.3.40)
    KEGG: chorismate--pyruvate lyase

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3438 type IV-A pilus assembly ATPase PilB (RefSeq) -0.72
    2 Shew_3439 type II secretion system protein (RefSeq) -0.72
    3 Shew_3759 imidazolonepropionase (RefSeq) -0.68
    4 Shew_0618 hypothetical protein (RefSeq) -0.67
    5 Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) -0.66
    6 Shew_2854 hypothetical protein (RefSeq) -0.63
    7 Shew_1809 NAD-glutamate dehydrogenase (RefSeq) -0.63
    8 Shew_2274 AAA ATPase (RefSeq) -0.63
    9 Shew_0220 phosphoglycolate phosphatase (RefSeq) -0.62
    10 Shew_3286 hypothetical protein (RefSeq) -0.62
    11 Shew_1885 hypothetical protein (RefSeq) -0.62
    12 Shew_1437 transcriptional regulator, TyrR (RefSeq) -0.62
    13 Shew_3440 prepilin peptidase (RefSeq) -0.62
    14 Shew_1188 riboflavin synthase subunit alpha (RefSeq) -0.61
    15 Shew_3437 O-antigen polymerase (RefSeq) -0.61
    16 Shew_0470 MATE efflux family protein (RefSeq) -0.59
    17 Shew_0308 hypothetical protein (RefSeq) -0.58
    18 Shew_0416 peptidase U62, modulator of DNA gyrase (RefSeq) -0.58
    19 Shew_1752 proprotein convertase, P (RefSeq) -0.57
    20 Shew_1751 hypothetical protein (RefSeq) -0.57

    Or look for positive cofitness