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  • Negative cofitness for Shew_3485 from Shewanella loihica PV-4

    peptidase S9 prolyl oligopeptidase (RefSeq)
    SEED: Peptidase S9, prolyl oligopeptidase active site domain protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3488 ribonuclease PH (RefSeq) -0.50
    2 Shew_2008 short-chain dehydrogenase/reductase SDR (RefSeq) -0.47
    3 Shew_1751 hypothetical protein (RefSeq) -0.43
    4 Shew_3838 transposase, IS4 family protein (RefSeq) -0.43
    5 Shew_R0033 tRNA-Arg (RefSeq) -0.42
    6 Shew_3154 LysR family transcriptional regulator (RefSeq) -0.42
    7 Shew_1693 hypothetical protein (RefSeq) -0.41
    8 Shew_2841 peptidylprolyl isomerase, FKBP-type (RefSeq) -0.40
    9 Shew_0626 hypothetical protein (RefSeq) -0.39
    10 Shew_2812 deoD purine nucleoside phosphorylase (RefSeq) -0.39
    11 Shew_1692 hypothetical protein (RefSeq) -0.38
    12 Shew_1402 glucose-1-phosphate thymidylyltransferase (RefSeq) -0.38
    13 Shew_0330 nifR3 family TIM-barrel protein (RefSeq) -0.37
    14 Shew_0929 Ig family protein (RefSeq) -0.37
    15 Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) -0.37
    16 Shew_0473 hypothetical protein (RefSeq) -0.37
    17 Shew_1691 hypothetical protein (RefSeq) -0.37
    18 Shew_2732 hypothetical protein (RefSeq) -0.37
    19 Shew_0585 cAMP-regulatory protein (RefSeq) -0.36
    20 Shew_0925 hypothetical protein (RefSeq) -0.36

    Or look for positive cofitness