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  • Negative cofitness for Shew_3476 from Shewanella loihica PV-4

    transporter DMT superfamily protein (RefSeq)
    SEED: Protein rarD
    KEGG: chloramphenicol-sensitive protein RarD

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_1883 hypothetical protein (RefSeq) -0.29
    2 Shew_0655 peptidase M16 domain-containing protein (RefSeq) -0.29
    3 Shew_0353 polysulphide reductase, NrfD (RefSeq) -0.29
    4 Shew_0601 hypothetical protein (RefSeq) -0.29
    5 Shew_1678 hypothetical protein (RefSeq) -0.29
    6 Shew_1161 NADH dehydrogenase (RefSeq) -0.28
    7 Shew_2384 O-methyltransferase family protein (RefSeq) -0.26
    8 Shew_0072 hypothetical protein (RefSeq) -0.26
    9 Shew_1453 methylated-DNA--protein-cysteinemethyltransferase (RefSeq) -0.26
    10 Shew_3018 alpha/beta hydrolase fold (RefSeq) -0.25
    11 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) -0.25
    12 Shew_2195 NADH dehydrogenase (RefSeq) -0.25
    13 Shew_2208 peptidase S8 and S53, subtilisin, kexin, sedolisin (RefSeq) -0.25
    14 Shew_1896 putative lipoprotein (RefSeq) -0.24
    15 Shew_3788 multi-sensor hybrid histidine kinase (RefSeq) -0.24
    16 Shew_3366 metal dependent phosphohydrolase (RefSeq) -0.24
    17 Shew_2148 hypothetical protein (RefSeq) -0.24
    18 Shew_0261 hypothetical protein (RefSeq) -0.24
    19 Shew_2565 hypothetical protein (RefSeq) -0.24
    20 Shew_1729 curli production assembly/transport component CsgG (RefSeq) -0.24

    Or look for positive cofitness