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  • Negative cofitness for Shew_3318 from Shewanella loihica PV-4

    integral membrane sensor signal transduction histidine kinase (RefSeq)
    SEED: two-component system sensor protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2181 hypothetical protein (RefSeq) -0.36
    2 Shew_3183 hypothetical protein (RefSeq) -0.32
    3 Shew_0847 Rh family protein/ammonium transporter (RefSeq) -0.31
    4 Shew_1252 transposase (RefSeq) -0.31
    5 Shew_0536 tRNA-dihydrouridine synthase A (RefSeq) -0.30
    6 Shew_3597 inner membrane protein YjeH (RefSeq) -0.30
    7 Shew_0682 major facilitator superfamily permease (RefSeq) -0.29
    8 Shew_3583 methyltransferase type 12 (RefSeq) -0.29
    9 Shew_2944 hypothetical protein (RefSeq) -0.29
    10 Shew_3624 hypothetical protein (RefSeq) -0.29
    11 Shew_0958 hypothetical protein (RefSeq) -0.28
    12 Shew_2162 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) -0.28
    13 Shew_2753 TPR repeat-containing protein (RefSeq) -0.27
    14 Shew_2249 Sua5/YciO/YrdC/YwlC family protein (RefSeq) -0.27
    15 Shew_2387 LysR family transcriptional regulator (RefSeq) -0.27
    16 Shew_0702 rhomboid family protein (RefSeq) -0.27
    17 Shew_2712 peptidase S15 (RefSeq) -0.26
    18 Shew_0929 Ig family protein (RefSeq) -0.26
    19 Shew_1597 maf protein (RefSeq) -0.26
    20 Shew_3531 aromatic amino acid transporter (RefSeq) -0.26

    Or look for positive cofitness