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  • Negative cofitness for Shew_3122 from Shewanella loihica PV-4

    PepSY-associated TM helix domain-containing protein (RefSeq)
    SEED: PepSY-associated TM helix

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3757 urocanate hydratase (RefSeq) -0.44
    2 Shew_0898 MltA-interacting MipA family protein (RefSeq) -0.42
    3 Shew_0220 phosphoglycolate phosphatase (RefSeq) -0.39
    4 Shew_1295 hypothetical protein (RefSeq) -0.39
    5 Shew_3693 ADP-heptose--lipooligosaccharide heptosyltransferase III (RefSeq) -0.39
    6 Shew_0113 CheA signal transduction histidine kinase (RefSeq) -0.37
    7 Shew_3694 ADP-L-glycero-D-manno-heptose-6-epimerase (RefSeq) -0.36
    8 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) -0.36
    9 Shew_3756 histidine ammonia-lyase (RefSeq) -0.36
    10 Shew_0886 hypothetical protein (RefSeq) -0.36
    11 Shew_3438 type IV-A pilus assembly ATPase PilB (RefSeq) -0.36
    12 Shew_0746 diguanylate cyclase (RefSeq) -0.35
    13 Shew_3439 type II secretion system protein (RefSeq) -0.35
    14 Shew_2533 gluconate transporter (RefSeq) -0.35
    15 Shew_1531 grxA glutaredoxin 1 (RefSeq) -0.34
    16 Shew_1069 hydroxylamine reductase (RefSeq) -0.34
    17 Shew_2128 transglutaminase domain-containing protein (RefSeq) -0.34
    18 Shew_3698 glycosyl transferase family protein (RefSeq) -0.34
    19 Shew_3045 sugar-binding protein, putative (RefSeq) -0.34
    20 Shew_3279 hypothetical protein (RefSeq) -0.33

    Or look for positive cofitness