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  • Negative cofitness for Shew_2588 from Shewanella loihica PV-4

    putative lipoprotein (RefSeq)
    SEED: Protein RcsF
    KEGG: RcsF protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2496 phage shock protein A, PspA (RefSeq) -0.37
    2 Shew_3120 phosphate-selective porin O and P (RefSeq) -0.36
    3 Shew_0192 TPR repeat-containing protein (RefSeq) -0.34
    4 Shew_1802 carboxy-terminal protease (RefSeq) -0.33
    5 Shew_1941 signal peptide peptidase SppA, 67K type (RefSeq) -0.33
    6 Shew_1050 sigma E regulatory protein, MucB/RseB (RefSeq) -0.32
    7 Shew_2087 hypothetical protein (RefSeq) -0.32
    8 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) -0.31
    9 Shew_2219 hypothetical protein (RefSeq) -0.31
    10 Shew_2086 hypothetical protein (RefSeq) -0.30
    11 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) -0.30
    12 Shew_3410 permease (RefSeq) -0.30
    13 Shew_2820 prfC peptide chain release factor 3 (RefSeq) -0.29
    14 Shew_2094 UBA/THIF-type NAD/FAD binding protein (RefSeq) -0.29
    15 Shew_1590 2OG-Fe(II) oxygenase (RefSeq) -0.29
    16 Shew_0117 protoheme IX farnesyltransferase (RefSeq) -0.29
    17 Shew_1540 alcohol dehydrogenase (RefSeq) -0.28
    18 Shew_3729 coproporphyrinogen III oxidase (RefSeq) -0.28
    19 Shew_1515 Na+/H+ antiporter NhaC (RefSeq) -0.28
    20 Shew_2044 ecotin precursor (RefSeq) -0.28

    Or look for positive cofitness