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  • Negative cofitness for Shew_2487 from Shewanella loihica PV-4

    histone deacetylase superfamily protein (RefSeq)
    SEED: Histone deacetylase/AcuC/AphA family protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3369 hypothetical protein (RefSeq) -0.33
    2 Shew_2156 lysine exporter protein LysE/YggA (RefSeq) -0.32
    3 Shew_3256 copper resistance B precursor (RefSeq) -0.32
    4 Shew_3765 hypothetical protein (RefSeq) -0.30
    5 Shew_1420 putative hydrolase (RefSeq) -0.29
    6 Shew_2977 diguanylate cyclase (RefSeq) -0.29
    7 Shew_1726 LuxR family transcriptional regulator (RefSeq) -0.28
    8 Shew_0390 MSHA biogenesis protein MshM (RefSeq) -0.28
    9 Shew_2988 putative signal transduction protein (RefSeq) -0.28
    10 Shew_3380 TatD-related deoxyribonuclease (RefSeq) -0.28
    11 Shew_2808 type IV pilus assembly PilZ (RefSeq) -0.28
    12 Shew_3381 diguanylate cyclase (RefSeq) -0.27
    13 Shew_2969 hypothetical protein (RefSeq) -0.26
    14 Shew_1418 UTP-glucose-1-phosphate uridylyltransferase GalU (RefSeq) -0.26
    15 Shew_3030 hypothetical protein (RefSeq) -0.26
    16 Shew_3797 RND family efflux transporter MFP subunit (RefSeq) -0.26
    17 Shew_1339 hypothetical protein (RefSeq) -0.26
    18 Shew_0401 MSHA biogenesis protein MshP (RefSeq) -0.26
    19 Shew_0110 MCP methyltransferase, CheR-type (RefSeq) -0.26
    20 Shew_1015 Cl- channel, voltage-gated family protein (RefSeq) -0.25

    Or look for positive cofitness