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  • Negative cofitness for Shew_2473 from Shewanella loihica PV-4

    tetratricopeptide domain-containing protein (RefSeq)
    SEED: TPR domain protein, putative component of TonB system

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3285 hypothetical protein (RefSeq) -0.50
    2 Shew_2166 hypothetical protein (RefSeq) -0.42
    3 Shew_3570 two component transcriptional regulator (RefSeq) -0.42
    4 Shew_1023 hypothetical protein (RefSeq) -0.41
    5 Shew_1782 MarR family transcriptional regulator (RefSeq) -0.38
    6 Shew_0593 ABC transporter-related protein (RefSeq) -0.37
    7 Shew_2525 decaheme cytochrome c (RefSeq) -0.36
    8 Shew_0434 hypothetical protein (RefSeq) -0.36
    9 Shew_0023 protoporphyrinogen oxidase (RefSeq) -0.35
    10 Shew_3344 dTDP-4-dehydrorhamnose reductase (RefSeq) -0.35
    11 Shew_1059 hypothetical protein (RefSeq) -0.35
    12 Shew_1161 NADH dehydrogenase (RefSeq) -0.34
    13 Shew_2095 phosphomethylpyrimidine kinase (RefSeq) -0.34
    14 Shew_2864 3-hydroxyacyl-CoA dehydrogenase, NAD-binding (RefSeq) -0.33
    15 Shew_3557 hypothetical protein (RefSeq) -0.33
    16 Shew_1896 putative lipoprotein (RefSeq) -0.33
    17 Shew_0895 integral membrane sensor signal transduction histidine kinase (RefSeq) -0.32
    18 Shew_0393 type II secretion system protein (RefSeq) -0.32
    19 Shew_1735 TonB-dependent receptor (RefSeq) -0.32
    20 Shew_3010 hypothetical protein (RefSeq) -0.32

    Or look for positive cofitness