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  • Negative cofitness for Shew_2456 from Shewanella loihica PV-4

    SMC domain-containing protein (RefSeq)
    SEED: Exonuclease SbcC
    KEGG: exonuclease SbcC

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2140 hypothetical protein (RefSeq) -0.46
    2 Shew_0597 major facilitator transporter (RefSeq) -0.46
    3 Shew_0246 hypothetical protein (RefSeq) -0.43
    4 Shew_2406 AraC family transcriptional regulator (RefSeq) -0.43
    5 Shew_2639 hypothetical protein (RefSeq) -0.43
    6 Shew_0253 secretion protein HlyD family protein (RefSeq) -0.43
    7 Shew_0651 hypothetical protein (RefSeq) -0.42
    8 Shew_0234 hypothetical protein (RefSeq) -0.42
    9 Shew_1929 methyl-accepting chemotaxis sensory transducer (RefSeq) -0.42
    10 Shew_1557 cupin 4 family protein (RefSeq) -0.42
    11 Shew_3646 hypothetical protein (RefSeq) -0.41
    12 Shew_0560 hypothetical protein (RefSeq) -0.41
    13 Shew_2787 peptidase U32 (RefSeq) -0.40
    14 Shew_2232 heat shock protein 90 (RefSeq) -0.40
    15 Shew_1828 peptidoglycan binding domain-containing protein (RefSeq) -0.40
    16 Shew_2708 Na(+)-translocating NADH-quinone reductase subunit B (RefSeq) -0.40
    17 Shew_2350 2OG-Fe(II) oxygenase (RefSeq) -0.40
    18 Shew_3084 AMP-dependent synthetase and ligase (RefSeq) -0.39
    19 Shew_2436 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) -0.39
    20 Shew_2143 hypothetical protein (RefSeq) -0.39

    Or look for positive cofitness