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  • Negative cofitness for Shew_2393 from Shewanella loihica PV-4

    acetate kinase (RefSeq)
    SEED: Acetate kinase (EC 2.7.2.1)
    KEGG: acetate kinase

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2808 type IV pilus assembly PilZ (RefSeq) -0.63
    2 Shew_3379 hypothetical protein (RefSeq) -0.61
    3 Shew_2988 putative signal transduction protein (RefSeq) -0.61
    4 Shew_3380 TatD-related deoxyribonuclease (RefSeq) -0.60
    5 Shew_3381 diguanylate cyclase (RefSeq) -0.60
    6 Shew_1681 diguanylate cyclase with PAS/PAC sensor (RefSeq) -0.59
    7 Shew_2977 diguanylate cyclase (RefSeq) -0.59
    8 Shew_1338 hypothetical protein (RefSeq) -0.57
    9 Shew_0392 type II secretion system protein E (RefSeq) -0.56
    10 Shew_0399 methylation site containing protein (RefSeq) -0.55
    11 Shew_0389 pilus (MSHA type) biogenesis protein MshL (RefSeq) -0.55
    12 Shew_3683 extracellular solute-binding protein (RefSeq) -0.54
    13 Shew_2754 diguanylate cyclase (RefSeq) -0.54
    14 Shew_0393 type II secretion system protein (RefSeq) -0.54
    15 Shew_0391 TPR repeat-containing protein (RefSeq) -0.53
    16 Shew_1337 hypothetical protein (RefSeq) -0.52
    17 Shew_0400 methylation site containing protein (RefSeq) -0.52
    18 Shew_0386 fimbrial assembly family protein (RefSeq) -0.51
    19 Shew_0402 MSHA biogenesis protein MshQ (RefSeq) -0.51
    20 Shew_3200 multi-sensor hybrid histidine kinase (RefSeq) -0.50

    Or look for positive cofitness