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  • Negative cofitness for Shew_2355 from Shewanella loihica PV-4

    hypothetical protein (RefSeq)
    SEED: UPF0319 protein VPA1584 precursor
    KEGG: hypothetical protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2423 hypothetical protein (RefSeq) -0.42
    2 Shew_3042 hypothetical protein (RefSeq) -0.42
    3 Shew_0462 hypothetical protein (RefSeq) -0.38
    4 Shew_3377 twin-arginine translocation protein, TatB subunit (RefSeq) -0.37
    5 Shew_1309 no description -0.37
    6 Shew_0636 hypothetical protein (RefSeq) -0.35
    7 Shew_2998 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) -0.35
    8 Shew_2723 NUDIX hydrolase (RefSeq) -0.35
    9 Shew_2787 peptidase U32 (RefSeq) -0.34
    10 Shew_2461 MORN repeat-containing protein (RefSeq) -0.34
    11 Shew_1140 ferrochelatase (RefSeq) -0.34
    12 Shew_3008 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) -0.33
    13 Shew_3056 hypothetical protein (RefSeq) -0.33
    14 Shew_2735 patatin (RefSeq) -0.33
    15 Shew_2241 hypothetical protein (RefSeq) -0.32
    16 Shew_0857 hypothetical protein (RefSeq) -0.32
    17 Shew_1455 dual specificity protein phosphatase (RefSeq) -0.32
    18 Shew_0776 deaminase-reductase domain-containing protein (RefSeq) -0.32
    19 Shew_0307 diguanylate cyclase/phosphodiesterase (RefSeq) -0.31
    20 Shew_2652 hypothetical protein (RefSeq) -0.31

    Or look for positive cofitness