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  • Negative cofitness for Shew_2299 from Shewanella loihica PV-4

    DNA topoisomerase III (RefSeq)
    SEED: DNA topoisomerase III (EC 5.99.1.2)
    KEGG: DNA topoisomerase III

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_0678 protoporphyrinogen oxidase (RefSeq) -0.46
    2 Shew_2106 hypothetical protein (RefSeq) -0.45
    3 Shew_2406 AraC family transcriptional regulator (RefSeq) -0.44
    4 Shew_2148 hypothetical protein (RefSeq) -0.43
    5 Shew_2644 hypothetical protein (RefSeq) -0.43
    6 Shew_1178 acriflavin resistance protein (RefSeq) -0.42
    7 Shew_1257 DNA repair protein RadC (RefSeq) -0.42
    8 Shew_1557 cupin 4 family protein (RefSeq) -0.42
    9 Shew_3193 endonuclease/exonuclease/phosphatase (RefSeq) -0.42
    10 Shew_1091 putative phosphoketolase (RefSeq) -0.42
    11 Shew_2618 diguanylate cyclase (RefSeq) -0.41
    12 Shew_1783 secretion protein HlyD family protein (RefSeq) -0.41
    13 Shew_0560 hypothetical protein (RefSeq) -0.40
    14 Shew_1396 response regulator receiver protein (RefSeq) -0.40
    15 Shew_0434 hypothetical protein (RefSeq) -0.40
    16 Shew_1420 putative hydrolase (RefSeq) -0.39
    17 Shew_1995 PP-loop domain-containing protein (RefSeq) -0.39
    18 Shew_1144 hypothetical protein (RefSeq) -0.39
    19 Shew_1356 flagellin domain-containing protein (RefSeq) -0.38
    20 Shew_2422 hypothetical protein (RefSeq) -0.38

    Or look for positive cofitness