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  • Negative cofitness for Shew_2233 from Shewanella loihica PV-4

    recombination protein RecR (RefSeq)
    SEED: Recombination protein RecR
    KEGG: recombination protein RecR

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_1452 AraC family transcriptional regulator (RefSeq) -0.42
    2 Shew_2724 indigoidine synthase A family protein (RefSeq) -0.39
    3 Shew_0994 KfrAs (RefSeq) -0.37
    4 Shew_1133 hypothetical protein (RefSeq) -0.35
    5 Shew_0843 nitrate/nitrite sensor protein NarQ (RefSeq) -0.34
    6 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) -0.34
    7 Shew_2581 peptidyl-dipeptidase Dcp (RefSeq) -0.34
    8 Shew_2901 phosphoesterase, PA-phosphatase related (RefSeq) -0.33
    9 Shew_3485 peptidase S9 prolyl oligopeptidase (RefSeq) -0.33
    10 Shew_2642 flavodoxin (RefSeq) -0.32
    11 Shew_1483 hypothetical protein (RefSeq) -0.32
    12 Shew_2739 Fmu (Sun) domain-containing protein (RefSeq) -0.32
    13 Shew_1144 hypothetical protein (RefSeq) -0.31
    14 Shew_1310 methyl-accepting chemotaxis sensory transducer (RefSeq) -0.31
    15 Shew_3366 metal dependent phosphohydrolase (RefSeq) -0.30
    16 Shew_1295 hypothetical protein (RefSeq) -0.30
    17 Shew_2795 xanthine/uracil/vitamin C permease (RefSeq) -0.29
    18 Shew_2189 alpha/beta hydrolase fold (RefSeq) -0.29
    19 Shew_3051 cupin 2 domain-containing protein (RefSeq) -0.29
    20 Shew_0136 stearoyl-CoA 9-desaturase (RefSeq) -0.29

    Or look for positive cofitness