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  • Negative cofitness for Shew_2201 from Shewanella loihica PV-4

    hisH: imidazole glycerol phosphate synthase subunit HisH (RefSeq)
    SEED: Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
    KEGG: glutamine amidotransferase

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3438 type IV-A pilus assembly ATPase PilB (RefSeq) -0.84
    2 Shew_3439 type II secretion system protein (RefSeq) -0.82
    3 Shew_3759 imidazolonepropionase (RefSeq) -0.75
    4 Shew_3437 O-antigen polymerase (RefSeq) -0.74
    5 Shew_3436 methylation site containing protein (RefSeq) -0.74
    6 Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) -0.70
    7 Shew_0470 MATE efflux family protein (RefSeq) -0.68
    8 Shew_0653 LuxR family transcriptional regulator (RefSeq) -0.67
    9 Shew_3630 bioH protein (RefSeq) -0.67
    10 Shew_3440 prepilin peptidase (RefSeq) -0.66
    11 Shew_2407 putative periplasmic protease (RefSeq) -0.66
    12 Shew_1625 L-serine dehydratase 1 (RefSeq) -0.65
    13 Shew_0231 hypothetical protein (RefSeq) -0.65
    14 Shew_1809 NAD-glutamate dehydrogenase (RefSeq) -0.64
    15 Shew_0612 hypothetical protein (RefSeq) -0.63
    16 Shew_0383 malate dehydrogenase (RefSeq) -0.62
    17 Shew_3757 urocanate hydratase (RefSeq) -0.62
    18 Shew_1106 type IV pilin biogenesis protein, putative (RefSeq) -0.62
    19 Shew_2906 hypothetical protein (RefSeq) -0.61
    20 Shew_0618 hypothetical protein (RefSeq) -0.61

    Or look for positive cofitness