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  • Negative cofitness for Shew_2181 from Shewanella loihica PV-4

    hypothetical protein (RefSeq)
    SEED: YcgN (Fragment)
    KEGG: hypothetical protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_1295 hypothetical protein (RefSeq) -0.39
    2 Shew_1531 grxA glutaredoxin 1 (RefSeq) -0.37
    3 Shew_2739 Fmu (Sun) domain-containing protein (RefSeq) -0.37
    4 Shew_3318 integral membrane sensor signal transduction histidine kinase (RefSeq) -0.36
    5 Shew_0273 hypothetical protein (RefSeq) -0.36
    6 Shew_3757 urocanate hydratase (RefSeq) -0.35
    7 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) -0.35
    8 Shew_3756 histidine ammonia-lyase (RefSeq) -0.35
    9 Shew_0226 hypothetical protein (RefSeq) -0.33
    10 Shew_3473 response regulator receiver protein (RefSeq) -0.33
    11 Shew_3415 short chain dehydrogenase (RefSeq) -0.33
    12 Shew_2549 NAD(P)H dehydrogenase (quinone) (RefSeq) -0.32
    13 Shew_1026 cobalamin biosynthesis protein CbiB (RefSeq) -0.32
    14 Shew_0424 amino acid carrier protein (RefSeq) -0.32
    15 Shew_2886 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) -0.31
    16 Shew_1452 AraC family transcriptional regulator (RefSeq) -0.31
    17 Shew_1113 tryptophan halogenase (RefSeq) -0.30
    18 Shew_0970 XRE family transcriptional regulator (RefSeq) -0.30
    19 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) -0.30
    20 Shew_2795 xanthine/uracil/vitamin C permease (RefSeq) -0.30

    Or look for positive cofitness