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  • Negative cofitness for Shew_1977 from Shewanella loihica PV-4

    diguanylate cyclase with PAS/PAC sensor (RefSeq)
    SEED: Sensory box/GGDEF domain protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_1152 MscS mechanosensitive ion channel (RefSeq) -0.41
    2 Shew_2825 tRNA pseudouridine synthase B (RefSeq) -0.41
    3 Shew_2642 flavodoxin (RefSeq) -0.39
    4 Shew_0970 XRE family transcriptional regulator (RefSeq) -0.39
    5 Shew_1434 UTP-glucose-1-phosphate uridylyltransferase GalU (RefSeq) -0.38
    6 Shew_1315 hypothetical protein (RefSeq) -0.37
    7 Shew_0698 Na+/H+ antiporter NhaC (RefSeq) -0.34
    8 Shew_1892 SNF2-related protein (RefSeq) -0.34
    9 Shew_0111 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) -0.32
    10 Shew_0454 enoyl-CoA hydratase (RefSeq) -0.32
    11 Shew_3732 collagenase (RefSeq) -0.32
    12 Shew_2052 TetR family transcriptional regulator (RefSeq) -0.31
    13 Shew_1759 hydrogenase accessory protein HypB (RefSeq) -0.31
    14 Shew_1124 trmB tRNA (guanine-N(7))-methyltransferase (RefSeq) -0.30
    15 Shew_2689 sulfotransferase (RefSeq) -0.30
    16 Shew_0845 isochorismatase hydrolase (RefSeq) -0.30
    17 Shew_1548 hypothetical protein (RefSeq) -0.30
    18 Shew_0201 acetylornithine deacetylase (RefSeq) -0.30
    19 Shew_0666 sulfite reductase subunit beta (RefSeq) -0.30
    20 Shew_3369 hypothetical protein (RefSeq) -0.30

    Or look for positive cofitness