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  • Negative cofitness for Shew_1760 from Shewanella loihica PV-4

    (NiFe) hydrogenase maturation protein HypF (RefSeq)
    SEED: [NiFe] hydrogenase metallocenter assembly protein HypF
    KEGG: hydrogenase maturation protein HypF

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2855 hypothetical protein (RefSeq) -0.38
    2 Shew_1809 NAD-glutamate dehydrogenase (RefSeq) -0.38
    3 Shew_0225 phosphoheptose isomerase (RefSeq) -0.37
    4 Shew_1657 sucC succinyl-CoA synthetase subunit beta (RefSeq) -0.36
    5 Shew_3759 imidazolonepropionase (RefSeq) -0.36
    6 Shew_2854 hypothetical protein (RefSeq) -0.35
    7 Shew_3630 bioH protein (RefSeq) -0.35
    8 Shew_3439 type II secretion system protein (RefSeq) -0.34
    9 Shew_0473 hypothetical protein (RefSeq) -0.34
    10 Shew_0706 short-chain dehydrogenase/reductase SDR (RefSeq) -0.34
    11 Shew_2169 hypothetical protein (RefSeq) -0.33
    12 Shew_1819 GntR family transcriptional regulator (RefSeq) -0.33
    13 Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) -0.32
    14 Shew_0618 hypothetical protein (RefSeq) -0.32
    15 Shew_3438 type IV-A pilus assembly ATPase PilB (RefSeq) -0.32
    16 Shew_0035 putative lipoprotein (RefSeq) -0.32
    17 Shew_3440 prepilin peptidase (RefSeq) -0.31
    18 Shew_0534 major facilitator transporter (RefSeq) -0.31
    19 Shew_0416 peptidase U62, modulator of DNA gyrase (RefSeq) -0.31
    20 Shew_1437 transcriptional regulator, TyrR (RefSeq) -0.31

    Or look for positive cofitness